AKT3 rSNPs, Transcriptional Factor Binding Sites and Human Disease
نویسندگان
چکیده
منابع مشابه
AKT3 rSNPs, Transcriptional Factor Binding Sites and Human Disease
Seven rSNPs (rs10157763, rs10927067, rs12031994, rs2125230, rs2345994, rs4132509 and rs4590646) in intron one of thev-akt murine thymoma viral oncogene homolog 3 (AKT3) gene have been significantly associated with either Chronic Mountain Sickness, Renal Cell Carcinoma risk or Aggressive Prostate Cancer. These rSNP alleles alter the DNA landscape for potential transcriptional factors (TFs) to at...
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Three rSNPs (rs3125289, rs1877474 and rs11119982) in one intron of the activating transcription factor 3 (ATF3) gene have been significantly associated with the human etiology of hypospadias and may be associated with human disease. These rSNP alleles alter the DNA landscape for potential transcriptional factors (TFs) to attach resulting in changes in transcriptional factor binding sites (TFBS)...
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Four regulatory single nucleotide polymorphisms (rSNPs) (rs2238631, rs2238632, rs2238633 and rs2238634) in intron one, two rSNPs (rs1131882 and rs4523) in exon 3 and one rSNP (rs5756) in the 3’UTR of the thromboxane A2 receptor (TBXA2R) gene have been associated with childhoodonset asthma in Asians. These rSNP alleles alter the DNA landscape for potential transcriptional factors (TFs) to attach...
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How to identify true transcription factor binding sites on the basis of sequence motif information (e.g., motif pattern, location, combination, etc.) is an important question in bioinformatics. We present "PeakRegressor," a system that identifies binding motifs by combining DNA-sequence data and ChIP-Seq data. PeakRegressor uses L1-norm log linear regression in order to predict peak values from...
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Understanding transcriptional regulation of gene expression is one of the greatest challenges of modern molecular biology. A central role in this mechanism is played by transcription factors (TF) which typically bind to specific, short DNA sequence motifs which are usually located in the upstream region of the regulated genes. We discuss here a simple and powerful approach for the identificatio...
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ژورنال
عنوان ژورنال: Open Journal of Blood Diseases
سال: 2013
ISSN: 2164-3180,2164-3199
DOI: 10.4236/ojbd.2013.34023